Biblio

Falke, J. A. , J. B. Dunham, C. E. Jordan, K. M. McNyset, and G. H. Reeves. 2013. Spatial Ecological Processes and Local Factors Predict the Distribution and Abundance of Spawning by Steelhead (Oncorhynchus mykiss) across a Complex Riverscape. PLoS ONE 8:e79232.

Falke, J. A. , L. L. Bailey, K. D. Fausch, and K. R. Bestgen. 2012. Colonization and extinction in dynamic habitats: an occupancy approach for a Great Plains stream fish assemblage. Ecology 93:858-867.

Falke, J. A. , K. D. Fausch, R. Magelky, A. Aldred, D. S. Durnford, L. K. Riley, and R. Oad. 2011. The role of groundwater pumping and drought in shaping ecological futures for stream fishes in a dryland river basin of the western Great Plains, USA. Ecohydrology 4:682-697.

Falke, J. A. , K. D. Fausch, K. R. Bestgen, and L. L. Bailey. 2010. Spawning phenology and habitat use in a Great Plains, USA, stream fish assemblage: an occupancy estimation approach. Canadian Journal of Fisheries and Aquatic Sciences 67:1942-1956.

Falke, J. A. , R. L. Flitcroft, J. B. Dunham, K. M. McNyset, P. F. Hessburg, and G. H. Reeves. 2015. Climate change and vulnerability of bull trout (Salvelinus confluentus) in a fire-prone landscape. Canadian Journal of Fisheries and Aquatic Sciences 72:304-318.

Falke, J. A. , and K. D. Fausch. 2010. From metapopulations to metacommunities: linking theory with empirical observations of the spatial population dynamics of stream fishes.. 207-233 in K. B. Gido and Jackson, D. A. Community ecology of stream fishes: concepts, approaches and techniques. . American Fisheries SocietyBethesda, MD.

Falke, J. A. , J. B. Dunham, D. Hockman-Wert, and R. Pahl. 2016. A Simple Prioritization Tool to Diagnose Impairment of Stream Temperature for Coldwater Fishes in the Great Basin. North American Journal of Fisheries Management 36:147-160.

Falke, J. A. , and K. B. Gido. 2006. Spatial effects of reservoirs on fish assemblages in great plains streams in Kansas, USA. River Research and Applications 22:55-68.

Falke, J. A. , K. R. Bestgen, and K. D. Fausch. 2010. Streamflow Reductions and Habitat Drying Affect Growth, Survival, and Recruitment of Brassy Minnow across a Great Plains Riverscape. Transactions of the American Fisheries Society 139:1566-1583.

Fancy, S. G. , and R. G. White. 1986. Predicting energy expenditures for activities of caribou from heart rates:123 - 130.

Fancy, S. G. , and R. G. White. 1987. Energy expenditures for locomotion by barren-ground caribou 65:122 - 128.

Fancy, S. G. , J. M. Blanchard, D. F. Holleman, K. J. Kokjer, and R. G. White. 1986. Validation of doubly labeled water method using a ruminant 251:R143-R149.

Fancy, S. G. , and R. G. White. 1985. Energy expenditures by caribou while cratering in snow 49:987 - 993.

Fancy, S. G. , and R. G. White. 1985. Incremental cost of activity. 143 - 159 in R. G. White and Hudson, R. J. Bioenergetics of wild herbivores. . CRC PressBoca Raton, FL.

Fastie, C. L. , A. H. Llyod, and P. Doak. 2003. Fire history and postfire forest development in an upland watershed of interior Alaska. Journal of Geophsyical Research 108:8150.

Fedorov, V. B. , A. V. Goropashnaya, O. Toien, N. C. Stewart, A. Y. Gracey, C. Change, S. Qin, G. Pertea, J. Quackenbush, L. C. Showe, M. K. Showe, B. B. Boyer, and B. M. Barnes. 2009. Elevated expression of protein biosynthesis genes in liver and muscle of hibernating black bears (Ursus americanus). Physiological Genomics 37:108-118.

Fedorov, V. B. , A. V. Goropashnaya, O. Toien, N. C. Stewart, C. Chang, H. Wang, J. Yan, L. C. Showe, M. K. Showe, S. W. Donahue, and B. M. Barnes. 2012. Preservation of bone mass and structure in hibernating black bears (Ursus americanus) through elevated expression of anabolic genes. Functional Integrative Genomics 12:357-365.

Fedorov, V. B. , A. V. Goropashnaya, O. Toien, N. C. Stewart, C. Chang, H. Wang, J. Yan, L. C. Showe, M. K. Showe, and B. M. Barnes. 2011. Modulation of gene expression in heart and liver of hibernating black bears (Ursus americanus). BMC Genomics 12:171.

Feist, D. D. , and R. G. White. 1989. Terrestrial mammals in cold. 327 - 360 in L. C. H. Wang Advances in comparative and environmental physiology. . Springer-VerlagBerlin.

Fellman, J. B. , E. Hood, R. T. Edwards, and J. B. Jones. 2009. Uptake of allochthonous dissolved organic matter from soil and salmon in coastal temperate rainforest streams. Ecosystems 12:747–759.

Fenster, C. B. , W. S. Armbruster, P. Wilson, M. R. Dudash, and J. D. Thomson. 2004. Pollination syndromes and floral specialization 35:375 - 403.

Ferrante, A. , and J. Gorski. 2010. Cutting edge: HLA-DM-mediated peptide exchange functions normally on MHC class II-peptide complexes that have been weakened by elimination of a conserved hydrogen bond.. J Immunol 184:1153-8.

Ferrante, A. , and J. Gorski. 2012. A Peptide/MHCII conformer generated in the presence of exchange peptide is substrate for HLA-DM editing.. Sci Rep 2:386.

Ferrante, A. , M. W. Anderson, C. S. Klug, and J. Gorski. 2008. HLA-DM mediates epitope selection by a "compare-exchange" mechanism when a potential peptide pool is available.. PLoS One 3:e3722.

Ferrante, A. , and J. Gorski. 2012. Enthalpy–Entropy Compensation and Cooperativity as Thermodynamic Epiphenomena of Structural Flexibility in Ligand–Receptor Interactions. Journal of Molecular Biology 417:454 - 467.